STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5W7X8_AGABUE3 ubiquitin-protein ligase. (838 aa)    
Predicted Functional Partners:
ste3.3
STE3-type pheromone receptor.
    
  0.912
ste3.2
STE3-type of pheromone receptor.
     
 0.905
ste3.4
STE3-type pheromone receptor.
     
  0.900
ste3.1
STE3-type pheromone receptor.
     
  0.900
K5XJP2_AGABU
Uncharacterized protein.
    
 0.898
K5XEW1_AGABU
Ubiquitin-like domain-containing protein.
    
 0.808
K5VSL0_AGABU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.714
K5XJ33_AGABU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.687
K5W5Q6_AGABU
VWFA domain-containing protein.
    
 0.678
K5XBL3_AGABU
RRM domain-containing protein.
 
  
   0.662
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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