STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5WXU6_AGABUUncharacterized protein; Belongs to the DEAD box helicase family. (446 aa)    
Predicted Functional Partners:
K5X8R1_AGABU
Sas10 domain-containing protein.
   
 0.998
K5WUL3_AGABU
Uncharacterized protein.
   
 0.988
K5XMC0_AGABU
Uncharacterized protein.
   
 
 0.987
K5XS17_AGABU
U3 small nucleolar RNA-associated protein 22.
   
 0.986
K5X532_AGABU
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.981
K5WWI5_AGABU
WD_REPEATS_REGION domain-containing protein.
   
 0.976
K5Y2M7_AGABU
Uncharacterized protein.
   
 0.975
K5XJG8_AGABU
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.974
K5XKX6_AGABU
Uncharacterized protein.
  
 0.974
K5W7T7_AGABU
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.968
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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