STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5X2U3_AGABUUncharacterized protein. (803 aa)    
Predicted Functional Partners:
K5X8R1_AGABU
Sas10 domain-containing protein.
   
   0.972
K5XY49_AGABU
Uncharacterized protein.
   
 
 0.924
K5W580_AGABU
Uncharacterized protein.
   
 
 0.908
K5Y262_AGABU
Uncharacterized protein.
   
 
 0.888
K5X194_AGABU
Uncharacterized protein.
   
 
 0.884
K5XH92_AGABU
Brix domain-containing protein.
   
    0.872
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.857
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
    0.849
K5Y2L7_AGABU
Nop domain-containing protein.
   
   0.849
K5VSV3_AGABU
PUM-HD domain-containing protein.
   
  
 0.844
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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