K5X6E8_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5X6E8_AGABU

Uncharacterized protein. (209 aa)

Predicted Functional Partners:

ATP20

0.967

K5XBF1_AGABU

0.966

ATP4

0.965

ATP3

0.958

ATP1

0.957

ATP2

0.954

K5WZV2_AGABU

0.948

K5WTY2_AGABU

0.916

ATP16

0.889

K5XZ20_AGABU

0.889

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP1	ATP16	K5X1I1	K5XC27	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	0.994
ATP1	ATP2	K5X1I1	K5Y3Q8	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ATP1	ATP20	K5X1I1	K5WW50	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP20 subunit G of the mitochondrial F1F0 ATP synthase.	0.998
ATP1	ATP3	K5X1I1	K5WSB6	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
ATP1	ATP4	K5X1I1	K5WMX7	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP4 subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	0.999
ATP1	K5WTY2_AGABU	K5X1I1	K5WTY2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP1	K5WZV2_AGABU	K5X1I1	K5WZV2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP1	K5X6E8_AGABU	K5X1I1	K5X6E8	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.957
ATP1	K5XBF1_AGABU	K5X1I1	K5XBF1	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP5 subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase.	0.999
ATP1	K5XZ20_AGABU	K5X1I1	K5XZ20	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.991
ATP16	ATP1	K5XC27	K5X1I1	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.994
ATP16	ATP2	K5XC27	K5Y3Q8	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.986
ATP16	ATP20	K5XC27	K5WW50	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP20 subunit G of the mitochondrial F1F0 ATP synthase.	0.983
ATP16	ATP3	K5XC27	K5WSB6	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP synthase subunit gamma.	0.994
ATP16	ATP4	K5XC27	K5WMX7	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP4 subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	0.993
ATP16	K5WTY2_AGABU	K5XC27	K5WTY2	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	Uncharacterized protein.	0.992
ATP16	K5WZV2_AGABU	K5XC27	K5WZV2	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	Uncharacterized protein.	0.972
ATP16	K5X6E8_AGABU	K5XC27	K5X6E8	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	Uncharacterized protein.	0.889
ATP16	K5XBF1_AGABU	K5XC27	K5XBF1	ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP synthase.	ATP5 subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase.	0.991
ATP2	ATP1	K5Y3Q8	K5X1I1	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999