K5X6H9_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5X6H9_AGABU

Uncharacterized protein. (1462 aa)

Predicted Functional Partners:

K5X3F6_AGABU

0.601

K5WVH0_AGABU

0.584

K5X2C6_AGABU

0.583

K5W692_AGABU

0.577

K5XG94_AGABU

0.571

K5W955_AGABU

0.569

K5WKT0_AGABU

0.566

K5XJL8_AGABU

0.548

K5X315_AGABU

0.525

K5VXM1_AGABU

0.507

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VXM1_AGABU	K5WKT0_AGABU	K5VXM1	K5WKT0	Uncharacterized protein.	Uncharacterized protein.	0.640
K5VXM1_AGABU	K5X6H9_AGABU	K5VXM1	K5X6H9	Uncharacterized protein.	Uncharacterized protein.	0.507
K5W692_AGABU	K5X2C6_AGABU	K5W692	K5X2C6	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.939
K5W692_AGABU	K5X6H9_AGABU	K5W692	K5X6H9	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.577
K5W955_AGABU	K5WVH0_AGABU	K5W955	K5WVH0	Uncharacterized protein; Belongs to the OSBP family.	MSP domain-containing protein.	0.520
K5W955_AGABU	K5X315_AGABU	K5W955	K5X315	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.654
K5W955_AGABU	K5X3F6_AGABU	K5W955	K5X3F6	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein; Belongs to the OSBP family.	0.489
K5W955_AGABU	K5X6H9_AGABU	K5W955	K5X6H9	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.569
K5WKT0_AGABU	K5VXM1_AGABU	K5WKT0	K5VXM1	Uncharacterized protein.	Uncharacterized protein.	0.640
K5WKT0_AGABU	K5X6H9_AGABU	K5WKT0	K5X6H9	Uncharacterized protein.	Uncharacterized protein.	0.566
K5WVH0_AGABU	K5W955_AGABU	K5WVH0	K5W955	MSP domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.520
K5WVH0_AGABU	K5X315_AGABU	K5WVH0	K5X315	MSP domain-containing protein.	Uncharacterized protein.	0.537
K5WVH0_AGABU	K5X3F6_AGABU	K5WVH0	K5X3F6	MSP domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.996
K5WVH0_AGABU	K5X6H9_AGABU	K5WVH0	K5X6H9	MSP domain-containing protein.	Uncharacterized protein.	0.584
K5WVH0_AGABU	K5XJL8_AGABU	K5WVH0	K5XJL8	MSP domain-containing protein.	PH_8 domain-containing protein.	0.953
K5X2C6_AGABU	K5W692_AGABU	K5X2C6	K5W692	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.939
K5X2C6_AGABU	K5X6H9_AGABU	K5X2C6	K5X6H9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.583
K5X315_AGABU	K5W955_AGABU	K5X315	K5W955	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.654
K5X315_AGABU	K5WVH0_AGABU	K5X315	K5WVH0	Uncharacterized protein.	MSP domain-containing protein.	0.537
K5X315_AGABU	K5X6H9_AGABU	K5X315	K5X6H9	Uncharacterized protein.	Uncharacterized protein.	0.525