K5XF65_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5XF65_AGABU

Uncharacterized protein. (316 aa)

Predicted Functional Partners:

K5XKB8_AGABU

0.996

K5XWZ0_AGABU

0.996

K5XYF3_AGABU

0.996

K5VXJ7_AGABU

0.995

K5X4U0_AGABU

0.995

K5X6J9_AGABU

0.995

K5VY50_AGABU

0.994

K5Y2M3_AGABU

0.994

K5XB44_AGABU

0.993

K5XGQ7_AGABU

0.993

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VXJ7_AGABU	K5VY50_AGABU	K5VXJ7	K5VY50	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.991
K5VXJ7_AGABU	K5X4U0_AGABU	K5VXJ7	K5X4U0	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.993
K5VXJ7_AGABU	K5X6J9_AGABU	K5VXJ7	K5X6J9	Uncharacterized protein.	Uncharacterized protein.	0.991
K5VXJ7_AGABU	K5XB44_AGABU	K5VXJ7	K5XB44	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.994
K5VXJ7_AGABU	K5XF65_AGABU	K5VXJ7	K5XF65	Uncharacterized protein.	Uncharacterized protein.	0.995
K5VXJ7_AGABU	K5XGQ7_AGABU	K5VXJ7	K5XGQ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.991
K5VXJ7_AGABU	K5XKB8_AGABU	K5VXJ7	K5XKB8	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.997
K5VXJ7_AGABU	K5XWZ0_AGABU	K5VXJ7	K5XWZ0	Uncharacterized protein.	Uncharacterized protein.	0.994
K5VXJ7_AGABU	K5XYF3_AGABU	K5VXJ7	K5XYF3	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.994
K5VXJ7_AGABU	K5Y2M3_AGABU	K5VXJ7	K5Y2M3	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.993
K5VY50_AGABU	K5VXJ7_AGABU	K5VY50	K5VXJ7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.991
K5VY50_AGABU	K5X4U0_AGABU	K5VY50	K5X4U0	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.996
K5VY50_AGABU	K5X6J9_AGABU	K5VY50	K5X6J9	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
K5VY50_AGABU	K5XB44_AGABU	K5VY50	K5XB44	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.997
K5VY50_AGABU	K5XF65_AGABU	K5VY50	K5XF65	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.994
K5VY50_AGABU	K5XGQ7_AGABU	K5VY50	K5XGQ7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.995
K5VY50_AGABU	K5XKB8_AGABU	K5VY50	K5XKB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
K5VY50_AGABU	K5XWZ0_AGABU	K5VY50	K5XWZ0	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.996
K5VY50_AGABU	K5XYF3_AGABU	K5VY50	K5XYF3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.998
K5VY50_AGABU	K5Y2M3_AGABU	K5VY50	K5Y2M3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L30 domain-containing protein.	0.980