STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5XH92_AGABUBrix domain-containing protein. (429 aa)    
Predicted Functional Partners:
K5WUQ0_AGABU
Uncharacterized protein.
   
   0.985
K5X5P8_AGABU
Uncharacterized protein.
   
 
 0.981
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.979
K5WAF2_AGABU
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
   0.976
K5X6K9_AGABU
Uncharacterized protein.
   
 
 0.976
K5X896_AGABU
Uncharacterized protein.
   
 
 0.972
K5W580_AGABU
Uncharacterized protein.
   
   0.965
K5XJN2_AGABU
CBF domain-containing protein.
   
   0.964
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.964
K5W4R1_AGABU
Brix domain-containing protein.
   
 
 0.958
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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