STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5XJQ0_AGABUUncharacterized protein. (245 aa)    
Predicted Functional Partners:
K5XZV7_AGABU
Protein YIP.
   
 
 0.936
K5WYW0_AGABU
PRA1 family protein.
   
 
 0.726
K5XTH3_AGABU
Protein YIP.
   
  
 0.604
K5XW45_AGABU
Uncharacterized protein.
   
 
 0.591
K5W7I9_AGABU
Uncharacterized protein.
   
 
 0.583
K5XKW0_AGABU
t-SNARE coiled-coil homology domain-containing protein.
      
 0.536
K5X2M2_AGABU
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.491
K5X434_AGABU
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
 
      0.486
K5XLF5_AGABU
KOW domain-containing protein.
 
      0.474
K5X395_AGABU
RF_PROK_I domain-containing protein.
 
      0.467
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.