STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5XKC4_AGABUUncharacterized protein. (1103 aa)    
Predicted Functional Partners:
K5W228_AGABU
Uncharacterized protein.
   
 0.999
K5WWD6_AGABU
WD_REPEATS_REGION domain-containing protein.
    
 0.999
K5WZM3_AGABU
Uncharacterized protein.
    
 0.946
K5XF32_AGABU
Uncharacterized protein.
   
 0.944
K5XX82_AGABU
RNase_PH domain-containing protein.
   
 0.941
K5WA72_AGABU
EXOSC1 domain-containing protein.
   
 0.938
K5VYF0_AGABU
RNase_PH domain-containing protein.
   
 0.930
K5VXU7_AGABU
Uncharacterized protein.
   
 0.929
K5X995_AGABU
RNase_PH domain-containing protein.
   
 0.923
K5WS10_AGABU
RNase_PH domain-containing protein.
   
 0.920
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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