K5XLG5_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5XLG5_AGABU

Uncharacterized protein. (619 aa)

Predicted Functional Partners:

K5W6Z3_AGABU

0.926

K5X3C6_AGABU

0.923

K5XHS1_AGABU

0.916

K5VSJ3_AGABU

0.914

K5XL31_AGABU

0.897

K5VZN0_AGABU

0.891

K5XAA2_AGABU

0.849

K5X8J4_AGABU

0.816

K5Y5G2_AGABU

0.735

K5Y377_AGABU

0.734

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VSJ3_AGABU	K5W6Z3_AGABU	K5VSJ3	K5W6Z3	Uncharacterized protein.	Uncharacterized protein.	0.968
K5VSJ3_AGABU	K5X8J4_AGABU	K5VSJ3	K5X8J4	Uncharacterized protein.	Uncharacterized protein.	0.816
K5VSJ3_AGABU	K5XAA2_AGABU	K5VSJ3	K5XAA2	Uncharacterized protein.	Uncharacterized protein.	0.959
K5VSJ3_AGABU	K5XLG5_AGABU	K5VSJ3	K5XLG5	Uncharacterized protein.	Uncharacterized protein.	0.914
K5VSJ3_AGABU	K5Y5G2_AGABU	K5VSJ3	K5Y5G2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.416
K5VZN0_AGABU	K5X3C6_AGABU	K5VZN0	K5X3C6	Uncharacterized protein.	Uncharacterized protein.	0.992
K5VZN0_AGABU	K5XHS1_AGABU	K5VZN0	K5XHS1	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.979
K5VZN0_AGABU	K5XL31_AGABU	K5VZN0	K5XL31	Uncharacterized protein.	Spindle pole body component.	0.997
K5VZN0_AGABU	K5XLG5_AGABU	K5VZN0	K5XLG5	Uncharacterized protein.	Uncharacterized protein.	0.891
K5VZN0_AGABU	K5Y377_AGABU	K5VZN0	K5Y377	Uncharacterized protein.	Uncharacterized protein.	0.896
K5W6Z3_AGABU	K5VSJ3_AGABU	K5W6Z3	K5VSJ3	Uncharacterized protein.	Uncharacterized protein.	0.968
K5W6Z3_AGABU	K5X8J4_AGABU	K5W6Z3	K5X8J4	Uncharacterized protein.	Uncharacterized protein.	0.901
K5W6Z3_AGABU	K5XAA2_AGABU	K5W6Z3	K5XAA2	Uncharacterized protein.	Uncharacterized protein.	0.939
K5W6Z3_AGABU	K5XLG5_AGABU	K5W6Z3	K5XLG5	Uncharacterized protein.	Uncharacterized protein.	0.926
K5W6Z3_AGABU	K5Y5G2_AGABU	K5W6Z3	K5Y5G2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.857
K5X3C6_AGABU	K5VZN0_AGABU	K5X3C6	K5VZN0	Uncharacterized protein.	Uncharacterized protein.	0.992
K5X3C6_AGABU	K5XHS1_AGABU	K5X3C6	K5XHS1	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.999
K5X3C6_AGABU	K5XL31_AGABU	K5X3C6	K5XL31	Uncharacterized protein.	Spindle pole body component.	0.992
K5X3C6_AGABU	K5XLG5_AGABU	K5X3C6	K5XLG5	Uncharacterized protein.	Uncharacterized protein.	0.923
K5X3C6_AGABU	K5Y377_AGABU	K5X3C6	K5Y377	Uncharacterized protein.	Uncharacterized protein.	0.784