K5XMM4_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5XMM4_AGABU

Uncharacterized protein. (417 aa)

Predicted Functional Partners:

K5XF63_AGABU

0.581

K5XK40_AGABU

0.555

K5XE97_AGABU

0.547

K5XTJ8_AGABU

0.530

K5X5Z5_AGABU

0.525

K5VKL4_AGABU

0.523

K5X4F6_AGABU

0.515

K5WNR7_AGABU

0.504

K5VQM6_AGABU

0.503

K5XHW6_AGABU

0.466

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VKL4_AGABU	K5VQM6_AGABU	K5VKL4	K5VQM6	APC1_C domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
K5VKL4_AGABU	K5WNR7_AGABU	K5VKL4	K5WNR7	APC1_C domain-containing protein.	RING-type domain-containing protein.	0.999
K5VKL4_AGABU	K5X4F6_AGABU	K5VKL4	K5X4F6	APC1_C domain-containing protein.	ANAPC5 domain-containing protein.	0.999
K5VKL4_AGABU	K5X5Z5_AGABU	K5VKL4	K5X5Z5	APC1_C domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
K5VKL4_AGABU	K5XMM4_AGABU	K5VKL4	K5XMM4	APC1_C domain-containing protein.	Uncharacterized protein.	0.523
K5VQM6_AGABU	K5VKL4_AGABU	K5VQM6	K5VKL4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	APC1_C domain-containing protein.	0.999
K5VQM6_AGABU	K5WNR7_AGABU	K5VQM6	K5WNR7	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.999
K5VQM6_AGABU	K5X4F6_AGABU	K5VQM6	K5X4F6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	ANAPC5 domain-containing protein.	0.999
K5VQM6_AGABU	K5X5Z5_AGABU	K5VQM6	K5X5Z5	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
K5VQM6_AGABU	K5XMM4_AGABU	K5VQM6	K5XMM4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.503
K5WNR7_AGABU	K5VKL4_AGABU	K5WNR7	K5VKL4	RING-type domain-containing protein.	APC1_C domain-containing protein.	0.999
K5WNR7_AGABU	K5VQM6_AGABU	K5WNR7	K5VQM6	RING-type domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
K5WNR7_AGABU	K5X4F6_AGABU	K5WNR7	K5X4F6	RING-type domain-containing protein.	ANAPC5 domain-containing protein.	0.999
K5WNR7_AGABU	K5X5Z5_AGABU	K5WNR7	K5X5Z5	RING-type domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
K5WNR7_AGABU	K5XMM4_AGABU	K5WNR7	K5XMM4	RING-type domain-containing protein.	Uncharacterized protein.	0.504
K5X4F6_AGABU	K5VKL4_AGABU	K5X4F6	K5VKL4	ANAPC5 domain-containing protein.	APC1_C domain-containing protein.	0.999
K5X4F6_AGABU	K5VQM6_AGABU	K5X4F6	K5VQM6	ANAPC5 domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
K5X4F6_AGABU	K5WNR7_AGABU	K5X4F6	K5WNR7	ANAPC5 domain-containing protein.	RING-type domain-containing protein.	0.999
K5X4F6_AGABU	K5X5Z5_AGABU	K5X4F6	K5X5Z5	ANAPC5 domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
K5X4F6_AGABU	K5XMM4_AGABU	K5X4F6	K5XMM4	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.515