K5XYL1_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5XYL1_AGABU

Uncharacterized protein. (425 aa)

Predicted Functional Partners:

K5XJ90_AGABU

0.949

K5XW49_AGABU

0.949

K5XGJ9_AGABU

0.882

K5XFC8_AGABU

0.828

SDH4

0.777

K5VJZ9_AGABU

0.753

K5W0Y6_AGABU

0.739

K5WYW8_AGABU

0.735

NdufA8

0.733

K5XW14_AGABU

0.722

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VJZ9_AGABU	K5XFC8_AGABU	K5VJZ9	K5XFC8	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.995
K5VJZ9_AGABU	K5XGJ9_AGABU	K5VJZ9	K5XGJ9	Uncharacterized protein.	Uncharacterized protein.	0.588
K5VJZ9_AGABU	K5XJ90_AGABU	K5VJZ9	K5XJ90	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.876
K5VJZ9_AGABU	K5XW49_AGABU	K5VJZ9	K5XW49	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.869
K5VJZ9_AGABU	K5XYL1_AGABU	K5VJZ9	K5XYL1	Uncharacterized protein.	Uncharacterized protein.	0.753
K5VJZ9_AGABU	NdufA8	K5VJZ9	K5X9T0	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.676
K5W0Y6_AGABU	K5XYL1_AGABU	K5W0Y6	K5XYL1	UBA_e1_C domain-containing protein.	Uncharacterized protein.	0.739
K5WYW8_AGABU	K5XW14_AGABU	K5WYW8	K5XW14	Slu7 domain-containing protein.	MPN domain-containing protein.	0.995
K5WYW8_AGABU	K5XYL1_AGABU	K5WYW8	K5XYL1	Slu7 domain-containing protein.	Uncharacterized protein.	0.735
K5XFC8_AGABU	K5VJZ9_AGABU	K5XFC8	K5VJZ9	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Uncharacterized protein.	0.995
K5XFC8_AGABU	K5XGJ9_AGABU	K5XFC8	K5XGJ9	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Uncharacterized protein.	0.632
K5XFC8_AGABU	K5XJ90_AGABU	K5XFC8	K5XJ90	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	zf-Tim10_DDP domain-containing protein.	0.896
K5XFC8_AGABU	K5XW49_AGABU	K5XFC8	K5XW49	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	zf-Tim10_DDP domain-containing protein.	0.897
K5XFC8_AGABU	K5XYL1_AGABU	K5XFC8	K5XYL1	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Uncharacterized protein.	0.828
K5XFC8_AGABU	NdufA8	K5XFC8	K5X9T0	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.543
K5XFC8_AGABU	SDH4	K5XFC8	K5WZI6	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.486
K5XGJ9_AGABU	K5VJZ9_AGABU	K5XGJ9	K5VJZ9	Uncharacterized protein.	Uncharacterized protein.	0.588
K5XGJ9_AGABU	K5XFC8_AGABU	K5XGJ9	K5XFC8	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.632
K5XGJ9_AGABU	K5XJ90_AGABU	K5XGJ9	K5XJ90	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.956
K5XGJ9_AGABU	K5XW49_AGABU	K5XGJ9	K5XW49	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.912