STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5XZ88_AGABUNUC173 domain-containing protein. (1246 aa)    
Predicted Functional Partners:
K5XY49_AGABU
Uncharacterized protein.
   
 
 0.999
K5WPM9_AGABU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
K5WYN0_AGABU
Bms1-type G domain-containing protein.
   
 
 0.997
K5WWU6_AGABU
Uncharacterized protein.
   
 
 0.996
K5W7T7_AGABU
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.990
K5XG81_AGABU
CBF domain-containing protein.
   
 
 0.987
K5Y2L7_AGABU
Nop domain-containing protein.
   
 
 0.986
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.975
K5X7A4_AGABU
Uncharacterized protein.
   
 
 0.972
K5XKX6_AGABU
Uncharacterized protein.
   
 
 0.967
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
Server load: low (30%) [HD]