K5Y3Q0_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5Y3Q0_AGABU

Uncharacterized protein. (356 aa)

Predicted Functional Partners:

K5VK58_AGABU

0.998

K5XFW0_AGABU

0.998

K5XM82_AGABU

0.998

K5W635_AGABU

0.995

K5WY08_AGABU

0.995

K5X4U5_AGABU

0.995

K5XP64_AGABU

0.995

K5W653_AGABU

0.993

K5W848_AGABU

0.993

K5X624_AGABU

0.993

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VK58_AGABU	K5W635_AGABU	K5VK58	K5W635	PCI domain-containing protein.	MPN domain-containing protein.	0.999
K5VK58_AGABU	K5W653_AGABU	K5VK58	K5W653	PCI domain-containing protein.	PCI domain-containing protein.	0.999
K5VK58_AGABU	K5W848_AGABU	K5VK58	K5W848	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5VK58_AGABU	K5WY08_AGABU	K5VK58	K5WY08	PCI domain-containing protein.	MPN domain-containing protein.	0.999
K5VK58_AGABU	K5X4U5_AGABU	K5VK58	K5X4U5	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5VK58_AGABU	K5X624_AGABU	K5VK58	K5X624	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5VK58_AGABU	K5XFW0_AGABU	K5VK58	K5XFW0	PCI domain-containing protein.	PCI domain-containing protein.	0.999
K5VK58_AGABU	K5XM82_AGABU	K5VK58	K5XM82	PCI domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
K5VK58_AGABU	K5XP64_AGABU	K5VK58	K5XP64	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5VK58_AGABU	K5Y3Q0_AGABU	K5VK58	K5Y3Q0	PCI domain-containing protein.	Uncharacterized protein.	0.998
K5W635_AGABU	K5VK58_AGABU	K5W635	K5VK58	MPN domain-containing protein.	PCI domain-containing protein.	0.999
K5W635_AGABU	K5W653_AGABU	K5W635	K5W653	MPN domain-containing protein.	PCI domain-containing protein.	0.999
K5W635_AGABU	K5W848_AGABU	K5W635	K5W848	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5W635_AGABU	K5WY08_AGABU	K5W635	K5WY08	MPN domain-containing protein.	MPN domain-containing protein.	0.999
K5W635_AGABU	K5X4U5_AGABU	K5W635	K5X4U5	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5W635_AGABU	K5X624_AGABU	K5W635	K5X624	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5W635_AGABU	K5XFW0_AGABU	K5W635	K5XFW0	MPN domain-containing protein.	PCI domain-containing protein.	0.999
K5W635_AGABU	K5XM82_AGABU	K5W635	K5XM82	MPN domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
K5W635_AGABU	K5XP64_AGABU	K5W635	K5XP64	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
K5W635_AGABU	K5Y3Q0_AGABU	K5W635	K5Y3Q0	MPN domain-containing protein.	Uncharacterized protein.	0.995