STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WH47_05337Collagen alpha-1(XV) chain. (148 aa)    
Predicted Functional Partners:
WH47_05095
Glycosyltransferase 25 family member.
    
  0.538
WH47_11121
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.538
WH47_02951
Matrix metalloproteinase-14.
    
 0.520
WH47_03041
Uncharacterized protein.
    
 0.520
WH47_12064
Matrix metalloproteinase-24.
    
 0.520
WH47_12057
Matrix metalloproteinase-24.
    
 0.520
WH47_12068
Matrix metalloproteinase-15.
    
 0.520
WH47_03335
Synaptonemal complex protein SC65.
     
 0.506
WH47_03336
Prolyl 3-hydroxylase 2.
     
 0.506
WH47_03469
Polyadenylate-binding protein 2.
    
 
 0.506
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.