STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WH47_02468DNA-directed RNA polymerase I subunit RPA43. (728 aa)    
Predicted Functional Partners:
WH47_02511
RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.999
WH47_01604
Putative DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.999
WH47_09797
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.999
WH47_09951
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
WH47_00143
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.999
WH47_11403
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.999
WH47_09351
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.999
WH47_07909
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
WH47_07720
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.998
WH47_11694
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.998
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.