STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WH47_12468CCAAT/enhancer-binding protein zeta. (815 aa)    
Predicted Functional Partners:
WH47_05764
Protein RRP5 like protein.
   
 
 0.997
WH47_11134
Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.991
WH47_10618
Putative ATP-dependent RNA helicase DDX56.
   
 
 0.990
WH47_02116
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.988
WH47_00172
RNA-binding protein 34.
   
 
 0.987
WH47_11533
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.984
WH47_01401
RNA helicase.
   
 
 0.982
WH47_08586
Ribosome production factor 2 like protein.
   
 
 0.979
WH47_00769
Nucleolar complex protein 3 like protein.
   
 
 0.976
WH47_05019
RRP12-like protein.
   
 
 0.976
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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