STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WH47_06849SUN domain-containing protein 1. (194 aa)    
Predicted Functional Partners:
WH47_03851
Lamin-C; Belongs to the intermediate filament family.
    
 0.773
WH47_07211
Histone H2A; Belongs to the histone H2A family.
    
 
 0.636
WH47_03491
Caltractin.
   
 
 0.571
WH47_08513
Uncharacterized protein.
    
 0.560
WH47_08059
Uncharacterized protein.
    
 0.560
Sgf11
SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
    
 0.560
WH47_09871
GAS2-like protein 1.
    
 0.560
WH47_08341
Uncharacterized protein.
    
 0.560
WH47_08340
Dystonin.
    
 0.560
WH47_10135
Nucleoprotein TPR.
    
 
 0.545
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.