STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX18011.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
ORX09931.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.608
ORX14865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.595
ORX09199.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.577
ORX11044.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.567
ORX18010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
ORX18882.1
RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
 
 0.540
sigA
RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.540
ORX15570.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.536
Your Current Organism:
Mycolicibacterium wolinskyi
NCBI taxonomy Id: 59750
Other names: ATCC 700010, CCUG 47168, CIP 106348, DSM 44493, JCM 13393, M. wolinskyi, Mycobacterium wolinskyi, strain MO739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.