STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU072_01730Acyl-CoA synthetase. (537 aa)    
Predicted Functional Partners:
AU072_01745
Acyl-CoA dehydrogenase.
 
 
 0.958
AU072_10380
annotation not available
  
0.931
AU072_10395
annotation not available
  
 0.931
AU072_14810
Linear gramicidin synthetase subunit D.
  
 0.931
AU072_01740
Acyl-CoA dehydrogenase.
 
 
  0.892
AU072_23520
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase bphD.
    
  0.890
AU072_08690
3-beta hydroxysteroid dehydrogenase/isomerase.
   
 
 0.876
AU072_01720
Enoyl-CoA hydratase/carnithine racemase.
  
  0.865
AU072_19575
Beta-ketoacyl synthase.
  
 0.844
AU072_01735
Amidohydrolase.
 
     0.840
Your Current Organism:
Mycolicibacterium novocastrense
NCBI taxonomy Id: 59813
Other names: CIP 105546, DSM 44203, JCM 18114, M. novocastrense, Mycobacterium novocastrense, Mycobacterium sp. GA-2613, Mycobacterium sp. GA-2617, Mycobacterium sp. GA-2945b, strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.