STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU072_04105DoxX family protein. (313 aa)    
Predicted Functional Partners:
AU072_04110
Membrane protein.
       0.842
AU072_04100
RDD domain-containing protein.
  
    0.641
AU072_19120
Pyrazinamidase/nicotinamidase pncA.
  
    0.578
AU072_22565
NTF2 domain-containing protein.
       0.574
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase.
    
  0.484
AU072_00450
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.480
AU072_04115
Thioesterase family protein.
       0.451
AU072_06885
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
  0.451
AU072_14665
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.451
AU072_20920
TetR family transcriptional regulator.
       0.433
Your Current Organism:
Mycolicibacterium novocastrense
NCBI taxonomy Id: 59813
Other names: CIP 105546, DSM 44203, JCM 18114, M. novocastrense, Mycobacterium novocastrense, Mycobacterium sp. GA-2613, Mycobacterium sp. GA-2617, Mycobacterium sp. GA-2945b, strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.