Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AU072_00045 | AU072_03345 | 3-hydroxyacyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.783 |
AU072_00045 | AU072_04250 | 3-hydroxyacyl-CoA dehydrogenase. | Hydroxylase. | 0.783 |
AU072_00045 | AU072_05915 | 3-hydroxyacyl-CoA dehydrogenase. | annotation not available | 0.783 |
AU072_00045 | AU072_23525 | 3-hydroxyacyl-CoA dehydrogenase. | Oxidoreductase. | 0.783 |
AU072_03345 | AU072_00045 | Acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.783 |
AU072_03345 | AU072_04130 | Acyl-CoA dehydrogenase. | Iron-sulfur binding oxidoreductase. | 0.659 |
AU072_03345 | AU072_04245 | Acyl-CoA dehydrogenase. | Extradiol dioxygenase. | 0.949 |
AU072_03345 | AU072_04250 | Acyl-CoA dehydrogenase. | Hydroxylase. | 0.905 |
AU072_03345 | AU072_04265 | Acyl-CoA dehydrogenase. | Alpha/beta hydrolase. | 0.524 |
AU072_03345 | AU072_23195 | Acyl-CoA dehydrogenase. | Rieske (2Fe-2S) domain-containing protein. | 0.643 |
AU072_03345 | AU072_23510 | Acyl-CoA dehydrogenase. | Oxidoreductase. | 0.907 |
AU072_03345 | AU072_23515 | Acyl-CoA dehydrogenase. | Biphenyl-2,3-diol-1,2-dioxygenase bphC. | 0.945 |
AU072_03345 | AU072_23525 | Acyl-CoA dehydrogenase. | Oxidoreductase. | 0.899 |
AU072_04130 | AU072_03345 | Iron-sulfur binding oxidoreductase. | Acyl-CoA dehydrogenase. | 0.659 |
AU072_04130 | AU072_04245 | Iron-sulfur binding oxidoreductase. | Extradiol dioxygenase. | 0.845 |
AU072_04130 | AU072_04250 | Iron-sulfur binding oxidoreductase. | Hydroxylase. | 0.791 |
AU072_04130 | AU072_04265 | Iron-sulfur binding oxidoreductase. | Alpha/beta hydrolase. | 0.437 |
AU072_04130 | AU072_05915 | Iron-sulfur binding oxidoreductase. | annotation not available | 0.677 |
AU072_04130 | AU072_23195 | Iron-sulfur binding oxidoreductase. | Rieske (2Fe-2S) domain-containing protein. | 0.880 |
AU072_04130 | AU072_23515 | Iron-sulfur binding oxidoreductase. | Biphenyl-2,3-diol-1,2-dioxygenase bphC. | 0.865 |
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