STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU072_05790annotation not available (116 aa)    
Predicted Functional Partners:
AU072_05795
annotation not available
       0.727
AU072_05800
annotation not available
       0.727
AU072_05785
annotation not available
       0.675
AU072_25835
Nitroreductase.
    
  0.615
AU072_05815
annotation not available
  
    0.586
AU072_05810
annotation not available
  
    0.583
AU072_05805
annotation not available
       0.580
AU072_05780
annotation not available
       0.545
AU072_20655
NAD(P) transhydrogenase alpha subunit pntAa.
    
  0.490
AU072_20660
NAD(P) transhydrogenase alpha subunit pntAb.
    
  0.490
Your Current Organism:
Mycolicibacterium novocastrense
NCBI taxonomy Id: 59813
Other names: CIP 105546, DSM 44203, JCM 18114, M. novocastrense, Mycobacterium novocastrense, Mycobacterium sp. GA-2613, Mycobacterium sp. GA-2617, Mycobacterium sp. GA-2945b, strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.