Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU072_01010 | AU072_07500 | AU072_01010 | AU072_07500 | Oxidoreductase subunit alpha. | Sortase-like acyltransferase. | 0.592 |
AU072_01010 | AU072_23880 | AU072_01010 | AU072_23880 | Oxidoreductase subunit alpha. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.991 |
AU072_01010 | metH | AU072_01010 | AU072_04340 | Oxidoreductase subunit alpha. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.714 |
AU072_07490 | AU072_07495 | AU072_07490 | AU072_07495 | Uncharacterized protein. | Major facilitator superfamily MFS_1. | 0.899 |
AU072_07490 | AU072_07500 | AU072_07490 | AU072_07500 | Uncharacterized protein. | Sortase-like acyltransferase. | 0.570 |
AU072_07490 | AU072_07505 | AU072_07490 | AU072_07505 | Uncharacterized protein. | Uncharacterized protein. | 0.475 |
AU072_07495 | AU072_07490 | AU072_07495 | AU072_07490 | Major facilitator superfamily MFS_1. | Uncharacterized protein. | 0.899 |
AU072_07495 | AU072_07500 | AU072_07495 | AU072_07500 | Major facilitator superfamily MFS_1. | Sortase-like acyltransferase. | 0.570 |
AU072_07495 | AU072_07505 | AU072_07495 | AU072_07505 | Major facilitator superfamily MFS_1. | Uncharacterized protein. | 0.475 |
AU072_07495 | metH | AU072_07495 | AU072_04340 | Major facilitator superfamily MFS_1. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.467 |
AU072_07500 | AU072_01010 | AU072_07500 | AU072_01010 | Sortase-like acyltransferase. | Oxidoreductase subunit alpha. | 0.592 |
AU072_07500 | AU072_07490 | AU072_07500 | AU072_07490 | Sortase-like acyltransferase. | Uncharacterized protein. | 0.570 |
AU072_07500 | AU072_07495 | AU072_07500 | AU072_07495 | Sortase-like acyltransferase. | Major facilitator superfamily MFS_1. | 0.570 |
AU072_07500 | AU072_07505 | AU072_07500 | AU072_07505 | Sortase-like acyltransferase. | Uncharacterized protein. | 0.641 |
AU072_07500 | AU072_09000 | AU072_07500 | AU072_09000 | Sortase-like acyltransferase. | Diaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.514 |
AU072_07500 | AU072_16395 | AU072_07500 | AU072_16395 | Sortase-like acyltransferase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.514 |
AU072_07500 | AU072_23880 | AU072_07500 | AU072_23880 | Sortase-like acyltransferase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.668 |
AU072_07500 | hisF | AU072_07500 | AU072_06365 | Sortase-like acyltransferase. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.527 |
AU072_07500 | hisH | AU072_07500 | AU072_06380 | Sortase-like acyltransferase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.528 |
AU072_07500 | metH | AU072_07500 | AU072_04340 | Sortase-like acyltransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.655 |
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