STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU072_12115N-acetylglucosamine-6-phosphate deacetylase nagA. (380 aa)    
Predicted Functional Partners:
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
 0.987
AU072_12110
Sugar-transport integral membrane protein sugI; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 0.980
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.978
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.936
AU072_21840
Uncharacterized protein.
  
    0.801
AU072_19510
Beta-glucosidase-like glycosyl hydrolase.
 
 
 0.772
AU072_16205
N-methylglutamate synthase subunit A.
    
 0.764
AU072_25325
Sugar kinase.
 
 
 0.713
AU072_12420
Penicillin-binding protein dacB1; Belongs to the peptidase S11 family.
     
 0.700
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.641
Your Current Organism:
Mycolicibacterium novocastrense
NCBI taxonomy Id: 59813
Other names: CIP 105546, DSM 44203, JCM 18114, M. novocastrense, Mycobacterium novocastrense, Mycobacterium sp. GA-2613, Mycobacterium sp. GA-2617, Mycobacterium sp. GA-2945b, strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.