Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AU072_12685 | AU072_12690 | TetR family transcriptional regulator. | Short-chain dehydrogenase. | 0.726 |
AU072_12685 | AU072_12695 | TetR family transcriptional regulator. | Quaternary ammonium compound-resistance protein sugE. | 0.545 |
AU072_12690 | AU072_12685 | Short-chain dehydrogenase. | TetR family transcriptional regulator. | 0.726 |
AU072_12690 | AU072_12695 | Short-chain dehydrogenase. | Quaternary ammonium compound-resistance protein sugE. | 0.773 |
AU072_12695 | AU072_12685 | Quaternary ammonium compound-resistance protein sugE. | TetR family transcriptional regulator. | 0.545 |
AU072_12695 | AU072_12690 | Quaternary ammonium compound-resistance protein sugE. | Short-chain dehydrogenase. | 0.773 |
AU072_12695 | AU072_21020 | Quaternary ammonium compound-resistance protein sugE. | Polysaccharide deacetylase. | 0.491 |
AU072_12695 | AU072_22665 | Quaternary ammonium compound-resistance protein sugE. | Small multidrug resistance protein, SMR family. | 0.486 |
AU072_12695 | AU072_22670 | Quaternary ammonium compound-resistance protein sugE. | Small multidrug resistance protein. | 0.500 |
AU072_21020 | AU072_12695 | Polysaccharide deacetylase. | Quaternary ammonium compound-resistance protein sugE. | 0.491 |
AU072_21020 | AU072_22665 | Polysaccharide deacetylase. | Small multidrug resistance protein, SMR family. | 0.491 |
AU072_21020 | AU072_22670 | Polysaccharide deacetylase. | Small multidrug resistance protein. | 0.491 |
AU072_22665 | AU072_12695 | Small multidrug resistance protein, SMR family. | Quaternary ammonium compound-resistance protein sugE. | 0.486 |
AU072_22665 | AU072_21020 | Small multidrug resistance protein, SMR family. | Polysaccharide deacetylase. | 0.491 |
AU072_22665 | AU072_22670 | Small multidrug resistance protein, SMR family. | Small multidrug resistance protein. | 0.873 |
AU072_22670 | AU072_12695 | Small multidrug resistance protein. | Quaternary ammonium compound-resistance protein sugE. | 0.500 |
AU072_22670 | AU072_21020 | Small multidrug resistance protein. | Polysaccharide deacetylase. | 0.491 |
AU072_22670 | AU072_22665 | Small multidrug resistance protein. | Small multidrug resistance protein, SMR family. | 0.873 |