Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU072_04460 | AU072_09040 | AU072_04460 | AU072_09040 | NAD-dependent nucleoside-diphosphate sugar epimerase. | NAD dependent epimerase/dehydratase. | 0.515 |
AU072_04460 | AU072_20390 | AU072_04460 | AU072_20390 | NAD-dependent nucleoside-diphosphate sugar epimerase. | Acetyltransferase. | 0.596 |
AU072_04460 | AU072_24735 | AU072_04460 | AU072_24735 | NAD-dependent nucleoside-diphosphate sugar epimerase. | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | 0.410 |
AU072_04460 | AU072_27060 | AU072_04460 | AU072_27060 | NAD-dependent nucleoside-diphosphate sugar epimerase. | CsbD-like protein. | 0.410 |
AU072_04805 | AU072_09040 | AU072_04805 | AU072_09040 | TIGR01777 family protein. | NAD dependent epimerase/dehydratase. | 0.515 |
AU072_04805 | AU072_20390 | AU072_04805 | AU072_20390 | TIGR01777 family protein. | Acetyltransferase. | 0.542 |
AU072_04805 | AU072_24735 | AU072_04805 | AU072_24735 | TIGR01777 family protein. | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | 0.410 |
AU072_04805 | AU072_27060 | AU072_04805 | AU072_27060 | TIGR01777 family protein. | CsbD-like protein. | 0.410 |
AU072_09040 | AU072_04460 | AU072_09040 | AU072_04460 | NAD dependent epimerase/dehydratase. | NAD-dependent nucleoside-diphosphate sugar epimerase. | 0.515 |
AU072_09040 | AU072_04805 | AU072_09040 | AU072_04805 | NAD dependent epimerase/dehydratase. | TIGR01777 family protein. | 0.515 |
AU072_09040 | AU072_20390 | AU072_09040 | AU072_20390 | NAD dependent epimerase/dehydratase. | Acetyltransferase. | 0.767 |
AU072_09040 | AU072_24735 | AU072_09040 | AU072_24735 | NAD dependent epimerase/dehydratase. | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | 0.515 |
AU072_09040 | AU072_27060 | AU072_09040 | AU072_27060 | NAD dependent epimerase/dehydratase. | CsbD-like protein. | 0.515 |
AU072_20385 | AU072_20390 | AU072_20385 | AU072_20390 | Uncharacterized protein. | Acetyltransferase. | 0.749 |
AU072_20385 | AU072_20395 | AU072_20385 | AU072_20395 | Uncharacterized protein. | Pirin-related protein; Belongs to the pirin family. | 0.689 |
AU072_20385 | AU072_20400 | AU072_20385 | AU072_20400 | Uncharacterized protein. | UPF0310 protein AU184_21670; Belongs to the UPF0310 family. | 0.657 |
AU072_20385 | AU072_20405 | AU072_20385 | AU072_20405 | Uncharacterized protein. | Acetyl-CoA carboxylase, carboxyl transferase subunit alpha. | 0.535 |
AU072_20390 | AU072_04460 | AU072_20390 | AU072_04460 | Acetyltransferase. | NAD-dependent nucleoside-diphosphate sugar epimerase. | 0.596 |
AU072_20390 | AU072_04805 | AU072_20390 | AU072_04805 | Acetyltransferase. | TIGR01777 family protein. | 0.542 |
AU072_20390 | AU072_09040 | AU072_20390 | AU072_09040 | Acetyltransferase. | NAD dependent epimerase/dehydratase. | 0.767 |
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