STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTS00288.1Alpha-hydroxy acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
KTS00287.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.952
KTS00285.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
KTS00289.1
Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.813
KTS00286.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.798
KTS00441.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.780
KTS00850.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.761
KTS00284.1
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.721
KTS00290.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
KTS00291.1
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.582
KTS01217.1
Metal chaperone, involved in Zn homeostasis, GTPase of family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.493
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.