STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTS00461.1Chromophore lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. (243 aa)    
Predicted Functional Partners:
KTS01721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
KTS00459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.701
KTR97917.1
PST family transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
KTR97109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.695
KTR98990.1
SrfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
KTS00655.1
Periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
KTR97981.1
QseC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
KTR99137.1
Glycosyltransferase, family 8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
KTS00327.1
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
KTS00844.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
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