STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTS00486.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
hpxK
Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.684
KTS00481.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.642
KTS00485.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
     0.629
hpxZ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
KTR98784.1
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.619
KTS00489.1
Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.596
KTS00487.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
KTS00483.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.564
KTS00484.1
Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.551
hpxX
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.