STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR99968.1DNA-invertase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
KTR97858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.829
KTR97863.1
Phage capsid scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.829
KTR99845.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.812
KTR97946.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.793
KTR97862.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.790
KTR97861.1
Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.784
KTR97865.1
Portal vertex protein; gpQ; Q protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; Q is a connector or portal protein that joins phage head and tail; Q, P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.758
KTR97857.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.747
KTR99847.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.730
KTR97860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.717
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.