STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR98379.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
KTR98377.1
2-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.916
KTR98378.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
KTR99140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
KTR98380.1
Glycerol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.657
KTS00451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
KTR98376.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
KTR98413.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
KTR97918.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
KTS01722.1
Mannosyltransferase OCH1-related enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
KTS01783.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.