STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR98087.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
KTR97470.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
KTR97314.1
secY/secA suppressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
ghoS
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.617
KTR97468.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.566
KTR99874.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.548
KTS01140.1
Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.538
KTS00438.1
Peroxiredoxin OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.532
KTR98088.1
Inner membrane protein, bestrophin family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
KTR97467.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.475
KTR99283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.464
Your Current Organism:
Pantoea dispersa
NCBI taxonomy Id: 59814
Other names: ATCC 14589, CCUG 25232, CIP 103338, DSM 30073, LMG 2603, LMG:2603, P. dispersa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.