Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KTR97926.1 | KTR97927.1 | NS375_18025 | NS375_18030 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
KTR97926.1 | KTR97928.1 | NS375_18025 | NS375_18035 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
KTR97926.1 | KTR98710.1 | NS375_18025 | NS375_13675 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | A4 beta-galactosidase middle domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
KTR97926.1 | KTS01211.1 | NS375_18025 | NS375_02095 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
KTR97926.1 | arnF | NS375_18025 | NS375_16055 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | 0.455 |
KTR97927.1 | KTR97926.1 | NS375_18030 | NS375_18025 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
KTR97927.1 | KTR97928.1 | NS375_18030 | NS375_18035 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
KTR97928.1 | KTR97926.1 | NS375_18035 | NS375_18025 | Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
KTR97928.1 | KTR97927.1 | NS375_18035 | NS375_18030 | Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
KTR98710.1 | KTR97926.1 | NS375_13675 | NS375_18025 | A4 beta-galactosidase middle domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
KTS01211.1 | KTR97926.1 | NS375_02095 | NS375_18025 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
arnF | KTR97926.1 | NS375_16055 | NS375_18025 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |