STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799595_00675Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_000799595_00674
Unannotated protein.
       0.646
GCA_000799595_03261
Unannotated protein.
  
    0.567
GCA_000799595_00676
Unannotated protein.
       0.550
GCA_000799595_00677
Unannotated protein.
       0.548
GCA_000799595_00732
Unannotated protein.
  
     0.453
GCA_000799595_01949
Unannotated protein.
  
     0.445
GCA_000799595_00319
Unannotated protein.
  
     0.444
GCA_000799595_03613
Unannotated protein.
  
     0.419
GCA_000799595_00930
Unannotated protein.
  
     0.406
GCA_000799595_00148
Unannotated protein.
  
     0.400
Your Current Organism:
Paenibacillus chondroitinus
NCBI taxonomy Id: 59842
Other names: ATCC 51184, Bacillus chondroitinus, CCUG 28527, CFBP 4265, CIP 103123, DSM 5051, HSCC 176, IFO 15376, JCM 9072, LMG 18040, LMG:18040, NBRC 15376, P. chondroitinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.