STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799595_01658Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_000799595_01657
Unannotated protein.
 
  
  0.981
GCA_000799595_00231
Unannotated protein.
 
  
  0.922
GCA_000799595_04583
Unannotated protein.
 
 
 0.796
GCA_000799595_01656
Unannotated protein.
 
   
 0.774
GCA_000799595_06164
Unannotated protein.
    
 0.764
GCA_000799595_04602
Unannotated protein.
 
 
 0.757
GCA_000799595_01826
Unannotated protein.
    
 0.717
GCA_000799595_06283
Unannotated protein.
     
 0.706
GCA_000799595_00367
Unannotated protein.
  
  
  0.691
GCA_000799595_06922
Unannotated protein.
  
  
  0.690
Your Current Organism:
Paenibacillus chondroitinus
NCBI taxonomy Id: 59842
Other names: ATCC 51184, Bacillus chondroitinus, CCUG 28527, CFBP 4265, CIP 103123, DSM 5051, HSCC 176, IFO 15376, JCM 9072, LMG 18040, LMG:18040, NBRC 15376, P. chondroitinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.