STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799595_07502Unannotated protein. (68 aa)    
Predicted Functional Partners:
GCA_000799595_07501
Unannotated protein.
 
     0.839
GCA_000799595_07503
Unannotated protein.
  
 
  0.741
GCA_000799595_06557
Unannotated protein.
  
  
  0.605
GCA_000799595_00937
Unannotated protein.
   
 
  0.499
GCA_000799595_07923
Unannotated protein.
  
  
  0.497
GCA_000799595_07960
Unannotated protein.
  
  
  0.471
GCA_000799595_02954
Unannotated protein.
  
     0.470
GCA_000799595_07850
Unannotated protein.
  
  
  0.469
GCA_000799595_07796
Unannotated protein.
 
  
  0.457
GCA_000799595_06893
Unannotated protein.
  
 
 0.456
Your Current Organism:
Paenibacillus chondroitinus
NCBI taxonomy Id: 59842
Other names: ATCC 51184, Bacillus chondroitinus, CCUG 28527, CFBP 4265, CIP 103123, DSM 5051, HSCC 176, IFO 15376, JCM 9072, LMG 18040, LMG:18040, NBRC 15376, P. chondroitinus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.