Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHD20213.1 | EHD20214.1 | BrE312_0772 | BrE312_0773 | Xylan 1,4-beta-xylosidase; KEGG: ddc:Dd586_2493 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal. | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | 0.411 |
EHD20214.1 | EHD20213.1 | BrE312_0773 | BrE312_0772 | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | Xylan 1,4-beta-xylosidase; KEGG: ddc:Dd586_2493 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal. | 0.411 |
EHD20214.1 | EHD20215.1 | BrE312_0773 | BrE312_0774 | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | KEGG: pct:PC1_3457 plasmid stabilization system; manually curated; PFAM: Plasmid stabilisation system; Belongs to the RelE toxin family. | 0.480 |
EHD20214.1 | EHD20216.1 | BrE312_0773 | BrE312_0775 | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | KEGG: pct:PC1_3456 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985. | 0.480 |
EHD20215.1 | EHD20214.1 | BrE312_0774 | BrE312_0773 | KEGG: pct:PC1_3457 plasmid stabilization system; manually curated; PFAM: Plasmid stabilisation system; Belongs to the RelE toxin family. | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | 0.480 |
EHD20215.1 | EHD20216.1 | BrE312_0774 | BrE312_0775 | KEGG: pct:PC1_3457 plasmid stabilization system; manually curated; PFAM: Plasmid stabilisation system; Belongs to the RelE toxin family. | KEGG: pct:PC1_3456 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985. | 0.990 |
EHD20216.1 | EHD20214.1 | BrE312_0775 | BrE312_0773 | KEGG: pct:PC1_3456 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985. | KEGG: ddc:Dd586_3398 entericidin EcnAB; manually curated; PFAM: Entericidin EcnAB. | 0.480 |
EHD20216.1 | EHD20215.1 | BrE312_0775 | BrE312_0774 | KEGG: pct:PC1_3456 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985. | KEGG: pct:PC1_3457 plasmid stabilization system; manually curated; PFAM: Plasmid stabilisation system; Belongs to the RelE toxin family. | 0.990 |