Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHD21207.1 | EHD21208.1 | BrE312_1808 | BrE312_1809 | D-lactate dehydrogenase; KEGG: pct:PC1_2294 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region. | KEGG: eca:ECA2003 hypothetical protein. | 0.515 |
EHD21207.1 | EHD21209.1 | BrE312_1808 | BrE312_1810 | D-lactate dehydrogenase; KEGG: pct:PC1_2294 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region. | KEGG: pct:PC1_2290 putative lipoprotein. | 0.498 |
EHD21208.1 | EHD21207.1 | BrE312_1809 | BrE312_1808 | KEGG: eca:ECA2003 hypothetical protein. | D-lactate dehydrogenase; KEGG: pct:PC1_2294 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region. | 0.515 |
EHD21208.1 | EHD21209.1 | BrE312_1809 | BrE312_1810 | KEGG: eca:ECA2003 hypothetical protein. | KEGG: pct:PC1_2290 putative lipoprotein. | 0.836 |
EHD21208.1 | EHD21210.1 | BrE312_1809 | BrE312_1811 | KEGG: eca:ECA2003 hypothetical protein. | TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: pct:PC1_2288 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal. | 0.411 |
EHD21209.1 | EHD21207.1 | BrE312_1810 | BrE312_1808 | KEGG: pct:PC1_2290 putative lipoprotein. | D-lactate dehydrogenase; KEGG: pct:PC1_2294 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region. | 0.498 |
EHD21209.1 | EHD21208.1 | BrE312_1810 | BrE312_1809 | KEGG: pct:PC1_2290 putative lipoprotein. | KEGG: eca:ECA2003 hypothetical protein. | 0.836 |
EHD21209.1 | EHD21210.1 | BrE312_1810 | BrE312_1811 | KEGG: pct:PC1_2290 putative lipoprotein. | TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: pct:PC1_2288 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal. | 0.431 |
EHD21210.1 | EHD21208.1 | BrE312_1811 | BrE312_1809 | TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: pct:PC1_2288 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal. | KEGG: eca:ECA2003 hypothetical protein. | 0.411 |
EHD21210.1 | EHD21209.1 | BrE312_1811 | BrE312_1810 | TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: pct:PC1_2288 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal. | KEGG: pct:PC1_2290 putative lipoprotein. | 0.431 |