STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD21800.1PFAM: Uncharacterised protein family UPF0150; KEGG: plu:plu4354 hypothetical protein. (135 aa)    
Predicted Functional Partners:
EHD21801.1
YcfA family protein; KEGG: kpe:KPK_3376 hypothetical protein; manually curated; PFAM: YcfA-like.
   
 
 0.935
EHD21301.1
YcfA family protein; KEGG: plu:plu3492 hypothetical protein; manually curated; PFAM: YcfA-like.
   
 
 0.840
EHD20554.1
YcfA family protein; KEGG: xne:XNC1_4211 hypothetical protein; manually curated; PFAM: YcfA-like.
   
 
 0.596
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.442
Your Current Organism:
Brenneria sp. EniD312
NCBI taxonomy Id: 598467
Other names: B. sp. EniD312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.