STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD21884.1PFAM: Protein of unknown function DUF882, bacterial; KEGG: pct:PC1_1781 hypothetical protein. (182 aa)    
Predicted Functional Partners:
EHD21883.1
KEGG: pct:PC1_1782 beta-lactamase domain protein.
  
    0.897
EHD21885.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: pct:PC1_1780 hypothetical protein.
 
     0.878
mepA
Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. Belongs to the peptidase M74 family.
  
     0.717
EHD20008.1
Cell wall hydrolase/autolysin; KEGG: eca:ECA3937 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
    
 0.560
EHD20302.1
KEGG: eca:ECA3555 metallo hydrolase.
  
    0.544
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
    0.544
EHD22879.1
Cell wall hydrolase/autolysin; KEGG: pwa:Pecwa_3384 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
     
 0.526
EHD20179.1
UPF0231 protein yacL; KEGG: pwa:Pecwa_3727 hypothetical protein; HAMAP: UPF0231 protein yacL; PFAM: Uncharacterised conserved protein UCP006287; Belongs to the UPF0231 family.
  
     0.492
EHD20365.1
PFAM: YkuD domain; KEGG: pct:PC1_3294 ErfK/YbiS/YcfS/YnhG family protein.
  
    0.443
EHD21092.1
PFAM: YkuD domain; KEGG: pwa:Pecwa_2746 ErfK/YbiS/YcfS/YnhG family protein.
 
     0.402
Your Current Organism:
Brenneria sp. EniD312
NCBI taxonomy Id: 598467
Other names: B. sp. EniD312
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