STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD22503.1KEGG: pct:PC1_1198 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase. (388 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 0.892
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.868
EHD22117.1
TIGRFAM: Amino acid adenylation; KEGG: xbo:XBJ1_0310 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain; Thioesterase.
  
 0.823
EHD23259.1
6-deoxyerythronolide-B synthase., NADPH:quinone reductase; KEGG: eca:ECA0603 type I polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Acyl transferase; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; Short-chain dehydrogenase/reductase SDR.
  
 0.819
EHD23836.1
PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; Molybdopterin dehydrogenase, FAD-binding; KEGG: cro:ROD_33881 hypothetical protein.
    
  0.753
EHD21503.1
KEGG: pct:PC1_2730 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.752
EHD21945.1
PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: pwa:Pecwa_1972 HCP oxidoreductase, NADH-dependent.
     
 0.752
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
  
 
 0.748
cmoM
Methyltransferase type 11; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
 
 
 0.701
EHD21636.1
KEGG: ddc:Dd586_1669 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
    0.638
Your Current Organism:
Brenneria sp. EniD312
NCBI taxonomy Id: 598467
Other names: B. sp. EniD312
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