| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHD19746.1 | EHD22771.1 | BrE312_0292 | BrE312_3406 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: pwa:Pecwa_3304 exonuclease SbcC. | 0.836 |
| EHD19746.1 | EHD23369.1 | BrE312_0292 | BrE312_4043 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | DEAD/DEAH box helicase domain protein; KEGG: eoh:ECO103_5067 putative helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal. | 0.779 |
| EHD19746.1 | mfd | BrE312_0292 | BrE312_1651 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.645 |
| EHD19746.1 | polA | BrE312_0292 | BrE312_4417 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.937 |
| EHD19746.1 | recA | BrE312_0292 | BrE312_1008 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.863 |
| EHD19746.1 | sbcD | BrE312_0292 | BrE312_3405 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: pwa:Pecwa_4154 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.865 |
| EHD20420.1 | EHD20421.1 | BrE312_0984 | BrE312_0985 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | 0.579 |
| EHD20420.1 | EHD21220.1 | BrE312_0984 | BrE312_1822 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | KEGG: pct:PC1_2268 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. | 0.743 |
| EHD20420.1 | EHD22771.1 | BrE312_0984 | BrE312_3406 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: pwa:Pecwa_3304 exonuclease SbcC. | 0.770 |
| EHD20420.1 | polA | BrE312_0984 | BrE312_4417 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.788 |
| EHD20420.1 | recA | BrE312_0984 | BrE312_1008 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.779 |
| EHD20420.1 | sbcD | BrE312_0984 | BrE312_3405 | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.893 |
| EHD20421.1 | EHD20420.1 | BrE312_0985 | BrE312_0984 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | 0.579 |
| EHD20421.1 | EHD21220.1 | BrE312_0985 | BrE312_1822 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | KEGG: pct:PC1_2268 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. | 0.743 |
| EHD20421.1 | EHD22771.1 | BrE312_0985 | BrE312_3406 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: pwa:Pecwa_3304 exonuclease SbcC. | 0.770 |
| EHD20421.1 | polA | BrE312_0985 | BrE312_4417 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.785 |
| EHD20421.1 | recA | BrE312_0985 | BrE312_1008 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.779 |
| EHD20421.1 | sbcD | BrE312_0985 | BrE312_3405 | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.893 |
| EHD21220.1 | EHD20420.1 | BrE312_1822 | BrE312_0984 | KEGG: pct:PC1_2268 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. | Ankyrin; KEGG: dze:Dd1591_2823 ankyrin; manually curated; SMART: Ankyrin repeat. | 0.743 |
| EHD21220.1 | EHD20421.1 | BrE312_1822 | BrE312_0985 | KEGG: pct:PC1_2268 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. | PFAM: Ankyrin repeat; KEGG: ddc:Dd586_1276 ankyrin. | 0.743 |
