STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD22887.1KEGG: pct:PC1_0909 hypothetical protein. (193 aa)    
Predicted Functional Partners:
EHD22888.1
KEGG: pwa:Pecwa_3395 hypothetical protein.
 
 0.998
EHD22885.1
Manually curated; KEGG: pwa:Pecwa_3392 putative prepilin peptidase dependent protein c precursor.
     
 0.846
EHD22886.1
PFAM: Protein of unknown function DUF2509; KEGG: pct:PC1_0910 hypothetical protein.
  
  
 0.833
EHD22884.1
Pitrilysin; Manually curated; KEGG: pct:PC1_0913 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; Belongs to the peptidase M16 family.
       0.806
recB
Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]
       0.805
recD
Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]
       0.792
recC
Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]
       0.792
EHD21023.1
KEGG: pwa:Pecwa_2821 biofilm formation regulatory protein BssS.
  
     0.620
EHD22042.1
Anti-sigma-28 factor, FlgM; KEGG: pct:PC1_2600 anti-sigma28 factor FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM.
  
     0.565
EHD21467.1
UPF0482 protein ynfB; KEGG: pct:PC1_2049 hypothetical protein; HAMAP: Protein of unknown function DUF1283; PFAM: Protein of unknown function DUF1283; Belongs to the UPF0482 family.
  
     0.554
Your Current Organism:
Brenneria sp. EniD312
NCBI taxonomy Id: 598467
Other names: B. sp. EniD312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.