node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rplS | BrE312_0434 | BrE312_1021 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.993 |
rplD | rplT | BrE312_0434 | BrE312_2304 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplD | rplU | BrE312_0434 | BrE312_3833 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
rplD | rplV | BrE312_0434 | BrE312_0438 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplD | rpmA | BrE312_0434 | BrE312_3832 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: dda:Dd703_3359 ribosomal protein L27; PFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.994 |
rplD | rpmB | BrE312_0434 | BrE312_0161 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: eic:NT01EI_0056 50S ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.991 |
rplD | rpsI | BrE312_0434 | BrE312_4119 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | PFAM: Ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.995 |
rplD | rpsJ | BrE312_0434 | BrE312_0432 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplD | rpsP | BrE312_0434 | BrE312_1018 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: eca:ECA3359 30S ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.992 |
rplD | rpsQ | BrE312_0434 | BrE312_0442 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplS | rplD | BrE312_1021 | BrE312_0434 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.993 |
rplS | rplT | BrE312_1021 | BrE312_2304 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.996 |
rplS | rplU | BrE312_1021 | BrE312_3833 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplS | rplV | BrE312_1021 | BrE312_0438 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.994 |
rplS | rpmA | BrE312_1021 | BrE312_3832 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: dda:Dd703_3359 ribosomal protein L27; PFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.998 |
rplS | rpmB | BrE312_1021 | BrE312_0161 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: eic:NT01EI_0056 50S ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.993 |
rplS | rpsI | BrE312_1021 | BrE312_4119 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | PFAM: Ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.994 |
rplS | rpsJ | BrE312_1021 | BrE312_0432 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.994 |
rplS | rpsP | BrE312_1021 | BrE312_1018 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: eca:ECA3359 30S ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
rplS | rpsQ | BrE312_1021 | BrE312_0442 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.996 |