node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHD20538.1 | EHD20860.1 | BrE312_1110 | BrE312_1448 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | 0.955 |
EHD20538.1 | EHD21254.1 | BrE312_1110 | BrE312_1858 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; PAS fold-4; PAS fold; ATP-binding region, ATPase-like; KEGG: pct:PC1_2203 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS. | 0.962 |
EHD20538.1 | EHD23045.1 | BrE312_1110 | BrE312_3695 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: pct:PC1_0698 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding. | 0.511 |
EHD20538.1 | EHD23313.1 | BrE312_1110 | BrE312_3985 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | KEGG: pwa:Pecwa_2070 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling. | 0.952 |
EHD20538.1 | EHD23429.1 | BrE312_1110 | BrE312_4108 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: pwa:Pecwa_0307 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; Signal transduction [...] | 0.984 |
EHD20538.1 | EHD23725.1 | BrE312_1110 | BrE312_4410 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: pwa:Pecwa_4504 nitrogen regulation protein NR(II); PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS. | 0.727 |
EHD20538.1 | ntrC | BrE312_1110 | BrE312_4411 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Nitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.849 |
EHD20538.1 | rcsC | BrE312_1110 | BrE312_3230 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Integral membrane sensor hybrid histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.947 |
EHD20538.1 | rcsD | BrE312_1110 | BrE312_3228 | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | Multi-sensor signal transduction histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. | 0.943 |
EHD20860.1 | EHD20538.1 | BrE312_1448 | BrE312_1110 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | 0.955 |
EHD20860.1 | EHD21254.1 | BrE312_1448 | BrE312_1858 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; PAS fold-4; PAS fold; ATP-binding region, ATPase-like; KEGG: pct:PC1_2203 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS. | 0.991 |
EHD20860.1 | EHD23045.1 | BrE312_1448 | BrE312_3695 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: pct:PC1_0698 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding. | 0.635 |
EHD20860.1 | EHD23313.1 | BrE312_1448 | BrE312_3985 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | KEGG: pwa:Pecwa_2070 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling. | 0.995 |
EHD20860.1 | EHD23429.1 | BrE312_1448 | BrE312_4108 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: pwa:Pecwa_0307 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; Signal transduction [...] | 0.998 |
EHD20860.1 | EHD23459.1 | BrE312_1448 | BrE312_4138 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.403 |
EHD20860.1 | EHD23725.1 | BrE312_1448 | BrE312_4410 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: pwa:Pecwa_4504 nitrogen regulation protein NR(II); PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS. | 0.798 |
EHD20860.1 | ntrC | BrE312_1448 | BrE312_4411 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Nitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.860 |
EHD20860.1 | rcsC | BrE312_1448 | BrE312_3230 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Integral membrane sensor hybrid histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.989 |
EHD20860.1 | rcsD | BrE312_1448 | BrE312_3228 | Response regulator receiver modulated CheW protein; KEGG: ddd:Dda3937_02985 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region. | Multi-sensor signal transduction histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. | 0.980 |
EHD21254.1 | EHD20538.1 | BrE312_1858 | BrE312_1110 | TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; PAS fold-4; PAS fold; ATP-binding region, ATPase-like; KEGG: pct:PC1_2203 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS. | Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pct:PC1_3064 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; GAF; PAC motif. | 0.962 |