STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD23825.1ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dda:Dd703_1807 extracellular solute-binding protein family 5. (531 aa)    
Predicted Functional Partners:
EHD22245.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_1424 binding-protein-dependent transport systems inner membrane component.
  
  0.862
EHD22872.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1006 ABC transporter permease.
 
  0.803
EHD23826.1
KEGG: rpb:RPB_4429 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; overlaps another CDS with the same product name.
 
    0.793
EHD20371.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1040 binding-protein dependent transport system inner membrane protein.
  
  0.787
EHD20370.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2012 binding-protein dependent transport system inner membrane protein.
 
  0.785
EHD22871.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1007 ABC transporter permease.
  
  0.783
EHD23827.1
5-oxoprolinase (ATP-hydrolyzing); KEGG: gox:GOX0216 N-methylhydantoinase A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; overlaps another CDS with the same product name.
 
     0.779
EHD22347.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2567 putative dipeptide transport system permease protein.
 
  0.755
EHD23045.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: pct:PC1_0698 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
    0.736
EHD23824.1
KEGG: vap:Vapar_1885 cysteine dioxygenase type I.
 
     0.673
Your Current Organism:
Brenneria sp. EniD312
NCBI taxonomy Id: 598467
Other names: B. sp. EniD312
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