STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAMH_0197Hypothetical protein; Identified by glimmer; putative. (219 aa)    
Predicted Functional Partners:
NAMH_0199
Molybdenum ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.989
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.980
modA
Molybdate ABC transporter, periplasmic molybdate-binding protein; Identified by match to protein family HMM TIGR01256.
 
  
 
0.964
NAMH_0196
ATPase; Identified by match to protein family HMM PF00005.
  
 
 0.935
NAMH_1313
Sulfate/molybdate ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.814
NAMH_0194
Conserved hypothetical protein.
  
  
 0.749
NAMH_0190
Hypothetical protein; Identified by glimmer; putative.
       0.442
NAMH_0192
Putative lipoprotein.
       0.442
napC
Periplasmic nitrate reductase, NapC membrane bound tetraheme cytochrome C subunit.
  
     0.430
Your Current Organism:
Nautilia profundicola
NCBI taxonomy Id: 598659
Other names: N. profundicola AmH, Nautilia profundicola AmH, Nautilia profundicola str. AmH, Nautilia profundicola strain AmH, Nautilia sp. AmH, epsilon proteobacterium AmH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.