STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAMH_0599Acetyltransferase, gnat family; Identified by match to protein family HMM PF00583. (335 aa)    
Predicted Functional Partners:
NAMH_0597
N-acyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891.
  
  
 0.798
NAMH_0958
Hypothetical protein; Identified by glimmer; putative.
 
     0.667
NAMH_0345
Putative lipoprotein; Identified by match to protein family HMM PF00188.
  
     0.639
NAMH_1776
Conserved hypothetical protein.
  
     0.587
NAMH_0595
Tellurite resistance protein TehB; Identified by match to protein family HMM PF08242.
       0.560
NAMH_1290
Conserved hypothetical protein; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
  
     0.552
NAMH_1184
Bacteriophage replication gene A protein (GPA); Identified by match to protein family HMM PF05840.
  
     0.517
NAMH_0796
Major facilitator superfamily MFS_1; Identified by match to protein family HMM PF07690.
  
     0.480
NAMH_0379
Conserved hypothetical protein.
  
     0.463
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.461
Your Current Organism:
Nautilia profundicola
NCBI taxonomy Id: 598659
Other names: N. profundicola AmH, Nautilia profundicola AmH, Nautilia profundicola str. AmH, Nautilia profundicola strain AmH, Nautilia sp. AmH, epsilon proteobacterium AmH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.