Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NAMH_0487 | NAMH_1345 | NAMH_0487 | NAMH_1345 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | 0.996 |
| NAMH_0487 | NAMH_1347 | NAMH_0487 | NAMH_1347 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | RNA polymerase sigma factor, sigma-F; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.930 |
| NAMH_0487 | NAMH_1358 | NAMH_0487 | NAMH_1358 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.983 |
| NAMH_0487 | NAMH_1445 | NAMH_0487 | NAMH_1445 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.977 |
| NAMH_0487 | flgB | NAMH_0487 | NAMH_1706 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.968 |
| NAMH_0487 | flgC | NAMH_0487 | NAMH_1705 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family. | 0.962 |
| NAMH_0487 | flgK | NAMH_0487 | NAMH_1470 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein FlgK; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; Belongs to the flagella basal body rod proteins family. | 0.985 |
| NAMH_0487 | fliL | NAMH_0487 | NAMH_0976 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.911 |
| NAMH_0487 | fliM | NAMH_0487 | NAMH_1346 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliM; Identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.970 |
| NAMH_1345 | NAMH_0487 | NAMH_1345 | NAMH_0487 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.996 |
| NAMH_1345 | NAMH_1347 | NAMH_1345 | NAMH_1347 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | RNA polymerase sigma factor, sigma-F; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.991 |
| NAMH_1345 | NAMH_1349 | NAMH_1345 | NAMH_1349 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | ATP-binding protein-atpases involved in chromosome partitioning; Identified by match to protein family HMM PF01656. | 0.954 |
| NAMH_1345 | NAMH_1358 | NAMH_1345 | NAMH_1358 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellin family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.971 |
| NAMH_1345 | NAMH_1445 | NAMH_1345 | NAMH_1445 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.991 |
| NAMH_1345 | flgB | NAMH_1345 | NAMH_1706 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.989 |
| NAMH_1345 | flgC | NAMH_1345 | NAMH_1705 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family. | 0.998 |
| NAMH_1345 | flgK | NAMH_1345 | NAMH_1470 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar hook-associated protein FlgK; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; Belongs to the flagella basal body rod proteins family. | 0.999 |
| NAMH_1345 | fliL | NAMH_1345 | NAMH_0976 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.980 |
| NAMH_1345 | fliM | NAMH_1345 | NAMH_1346 | Flagellar protein FliY; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480. | Flagellar motor switch protein FliM; Identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.999 |
| NAMH_1347 | NAMH_0487 | NAMH_1347 | NAMH_0487 | RNA polymerase sigma factor, sigma-F; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.930 |
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